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COURSE SYLLABUS
GENETIC
1 Course Title: GENETIC
2 Course Code: VET1019
3 Type of Course: Compulsory
4 Level of Course: First Cycle
5 Year of Study: 1
6 Semester: 1
7 ECTS Credits Allocated: 2
8 Theoretical (hour/week): 2
9 Practice (hour/week) : 0
10 Laboratory (hour/week) : 0
11 Prerequisites: None
12 Recommended optional programme components: None
13 Language: English
14 Mode of Delivery: Face to face
15 Course Coordinator: Doç.Dr. ÖZDEN ÇOBANOĞLU
16 Course Lecturers: Doç. Dr. Sena ARDIÇLI
Araş. Gör. Dr. Deniz DİNÇEL
17 Contactinformation of the Course Coordinator: Doç. Dr. Özden ÇOBANOĞLU
e-mail: ocobanoglu@uludag.edu.tr
U.Ü. Veteriner Fakültesi Genetik Anabilim Dalı Nilüfer/BURSA
18 Website:
19 Objective of the Course: This course covers principles of prokaryotic and eukaryotic genetics. In this course, students will expand on the basic knowledge of genetics. This will involve learning new terminology and new core concepts about the principle of genetics which will be the basis for the other classes during their education. They will able to apply the general concept of genetics to veterinary science. The molecular basis of heredity, chromosome structure, patterns of Mendelian and non-Mendelian inheritance, and biotechnological applications will be covered in this course. Thus, the course provides the students with a review of analytical, molecular and cellular genetics along with new developments. Upon successful completion of this course, students should be able to recognize and describe genetic phenomena and demonstrate knowledge of important genetic principles.
20 Contribution of the Course to Professional Development
21 Learning Outcomes:
1 Understand the principles of inheritance as formulated by Mendel.;
2 Apply the principles of extensions to Mendelian inheritance, including codominance, gene interactions, epistasis, multiple alleles, pleiotropy, lethal alleles, penetrance and sex-linked transmission.;
3 Learn about cell division mechanisms in prokaryotic and eukaryotic organisms. Analyze basic genetic data using statistical procedures.;
4 Understand and relate the structure and function of the DNA and RNA molecules, realize their functional roles in encoding genetic material and obtain knowledge about gene expression.;
5 Able to describe the basic aspects of the flow of genetic information from DNA to proteins by central dogma.;
6 Distinguish the chromosomal number among different species and gain a cause and an effect of changes in chromosome number and structure. Learn how to identify and classify DNA mutations. ;
7 Understand gene transfer mechanisms in prokaryotic organisms and learn how to apply recombinant DNA technology to animal genomes theoretically.;
8 Learn about gene regulation with emphasis on repressible vs. inducible operon systems.;
9 Get information about basic and third generation DNA sequencing methodologies.;
10 Obtain information about genetic markers and how to apply these techniques to animal breeding. ;
22 Course Content:
Week Theoretical Practical
1 Introduction to the Course and Milestones of Genetics; Mendelian Genetics: The chromosomal basis of inheritance, Mendel’s principles of segregation, and independent assortment, monohybrid, dihybrid and trihybrid crosses.
2 Chi-square Test for Mendelian Inheritance: Statistical methods to describe the mode of inheritance in monohybrid and dihybrid crosses, the laws of probability to statistically analyze the outcomes of genetic crosses, and interpreting the results in terms of biological sense.
3 Variations on Mendelian Inheritance I: Genetic deviations from Mendelian principles, and examples of non-Mendelian inheritance; like incomplete dominance, co-dominance, gene interactions, and type of epistasis.
4 Exceptions on Mendelian Genetics II: Examination of other examples for the mode of non-Mendelian inheritance, like pleiotropy, multiple alleles, polygenic inheritance, essential genes, lethal alleles, penetrance, environmental effects, and genetic heterogeneity.
5 Sex Linked Inheritance: Sex determination in different species, sex linkage, X chromosome Inactivation, dosage compensation, cytoplasmic inheritance, genetic maternal effect, sex-influenced characteristics and pedigree analysis.
6 The Cell Division; Mitosis and Meiosis: Basic concept about cell division and genetics, prokaryotic cell division, eukaryotic cell cycle, mitosis, cytokinesis, regulation of the cell cycle, meiosis, crossing over, a cause of genetic variation, gametogenesis; spermatogenesis and oogenesis.
7 Linkage and Chromosomal Mapping: Linkage and recombination, crossing over, chromosome theory, a genetic map of the Drosophila melanogaster, linkage mapping in dihybrid and trihybrid cross by recombination frequencies between genes, interference, and coefficient of coincidence.
8 Identifying DNA and RNA as the Genetic Material: Search for genetic material; the discovery of DNA by Griffith’s Transformation Experiment, Avery, MacLeod and McCarty’s experiments, Hershey-Chase bacteriophage experiment, and a discovery of RNA by Tobacco Mosaic Virus (TMV) experiment.
9 The Structure and Analysis of DNA and RNA: Structure of nucleic acid, properties of pyrimidines and purines, the anatomy of DNA, a discovery of the structure of DNA, the DNA double helix as Watson and Crick model, polymorphism of DNA, structural features of DNA and a structure of RNA
10 DNA Packing in Prokaryotic and Eukaryotic Chromosomes: DNA condensation, DNA supercoiling, nucleosomes, eukaryotic chromosomal organization, a structure of chromatin, chromosome folding, DNA packing. Gene Expression and Regulation: Repressible vs. inducible operon systems; Lac Operon and Tryptophan Operons in E. coli.
11 DNA Replication in Prokaryotes and Eukaryotes: Models for DNA replication, Meselson-Stahl experiment, a mechanism of DNA replication in prokaryotes, replication of DNA in eukaryotes, enzymes required for replication, directionality of synthesis in DNA strands, DNA repair system, editing, and proofreading of DNA.
12 The Central Dogma; Transcription, Translation and Protein Synthesis: Defining central dogma of molecular biology, transcription, RNA processing, genetic code, wobble base pairing, translation, protein synthesis, the structure of amino acid, principles of polarity in amino acid.
13 The Genetic Mutations: Cause of mutation, types of mutations; spontaneous mutations, single base substitution and frameshift mutations, chromosomal disorders, nondisjunction in autosomal chromosomes, trisomies, nondisjunction of X chromosomes and induced mutations Genetic Transfer in Bacteria: Transformation, transduction, and conjugation, plasmid structure in bacteria. Recombinant DNA Technology: Type of vectors, techniques of recombinant DNA technology; electroporation, protoplast fusion, and injection: gene gun and microinjection.
14 DNA Sequencing Techniques: Basic methods for sequencing; Maxam-Gilbert and Sanger methods, Whole genome sequencing and New DNA sequencing methods Molecular Markers: Describing the principles of Polymerase Chain Reaction (PCR) and their applications with molecular markers in animal breeding studies.
23 Textbooks, References and/or Other Materials: 1. Veteriner Genetik, Odabaşioglu F. İkinci Basim. Lazer Ofset MatbaaTesisleri San.Tic. Ltd. Şti. Ankara, 2012.
2. Principles of Genetics. Sunstad D.P., Simmons M.J., and Jenkins J.B. John Wiley and Sons Inc. New York, USA, 1997.
3. An Introduction to Genetic Analysis. Griffiths A.J.F., Miller J.H., Suzuki D.T., Lewontin R.C., Gelbart W.M. 5th Edition. W. H. Freeman and Company. New York, USA, 1993.
4. Genetik. Yildirim A., Karadag Y., Kandemir N., Sakin M.A. 2. Baski. Nobel Yayin Dagitim, Ankara, 2010.
5. Genetic Class Notes. Cobanoglu O. Bursa Uludag Univ., Faculty Veterinary-Medicine. Bursa, 2017.
24 Assesment
TERM LEARNING ACTIVITIES NUMBER PERCENT
Midterm Exam 1 40
Quiz 1 10
Homeworks, Performances 0 0
Final Exam 1 50
Total 3 100
Contribution of Term (Year) Learning Activities to Success Grade 50
Contribution of Final Exam to Success Grade 50
Total 100
Measurement and Evaluation Techniques Used in the Course
Information
25 ECTS / WORK LOAD TABLE
Activites NUMBER TIME [Hour] Total WorkLoad [Hour]
Theoretical 14 2 28
Practicals/Labs 0 0 0
Self Study and Preparation 10 1 10
Homeworks, Performances 0 0 0
Projects 0 0 0
Field Studies 0 0 0
Midtermexams 1 10 10
Others 0 0 0
Final Exams 1 12 12
Total WorkLoad 60
Total workload/ 30 hr 2
ECTS Credit of the Course 2
26 CONTRIBUTION OF LEARNING OUTCOMES TO PROGRAMME QUALIFICATIONS
PQ1 PQ2 PQ3 PQ4 PQ5 PQ6 PQ7 PQ8 PQ9 PQ10 PQ11 PQ12
LO1 5 3 1 1 5 5 3 2 3 2 2 4
LO2 5 3 1 3 5 5 2 2 2 2 4 5
LO3 5 3 1 2 5 5 2 3 4 1 4 5
LO4 5 3 1 2 5 5 2 3 4 1 4 5
LO5 5 3 1 1 5 5 3 2 3 2 2 4
LO6 5 3 1 3 5 5 2 2 2 2 4 5
LO7 5 3 1 2 5 5 2 3 4 1 4 5
LO8 5 3 1 2 5 5 2 3 4 1 4 5
LO9 5 3 1 2 5 5 2 3 4 1 4 5
LO10 5 3 1 2 5 5 2 3 4 1 4 5
LO: Learning Objectives PQ: Program Qualifications
Contribution Level: 1 Very Low 2 Low 3 Medium 4 High 5 Very High
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